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GraphSpace: An S4 class for igraph objects

Value

An S4 class object.

Slots

nodes

A data frame containing node coordinates, attributes, and metadata.

edges

A data frame containing edge relationships and attributes.

graph

An igraph object representing the graph structure.

image

A raster object (see as.raster) holding the original background image as supplied by the user. Never modified after construction; always serves as the stable source for normalizeGraphSpace().

canvas

A raster object holding the processed, render-ready image produced by normalizeGraphSpace(). Receives all centering, flipping, and margin adjustments. When this slot contains only the empty sentinel, downstream accessors fall back to @image automatically; see gs_image.

fdata

A Matrix object storing high-dimensional feature data associated with graph nodes.

pars

A list with parameters.

misc

A list with intermediate objects for downstream methods.

uuid

A Universally Unique Identifier (UUID) for the object instance.

Constructor

see GraphSpace constructor.