To install RGraphSpace, R version 4.5 or greater is required.
Release version
# Release version from CRAN
install.packages("RGraphSpace")Development version
# Dependencies to build the vignettes
install.packages("knitr")
install.packages("rmarkdown")
install.packages("remotes")
# Package source
remotes::install_github("sysbiolab/RGraphSpace", build_vignettes=TRUE)Other packages used in the tutorials
install.packages("ggraph")
install.packages("sf")
install.packages("maps")
install.packages("geometry")
install.packages("ggnewscale")
install.packages("patchwork")
install.packages("Seurat")
remotes::install_github("satijalab/seurat-data")
install.packages("BiocManager")
BiocManager::install("RedeR")
BiocManager::install("glmGamPoi")Citation
- Sysbiolab Team. “RGraphSpace: A lightweight interface between igraph and ggplot2 graphics.” R package, 2023. Doi: 10.32614/CRAN.package.RGraphSpace
Licenses
The PathwaySpace package is distributed under Artistic-2.0